BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D02SP1|AL426995
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1563 0.0
>3x_Contig1766
Length = 23951
Score = 1563 bits (785), Expect = 0.0
Identities = 799/806 (99%), Gaps = 1/806 (0%)
Strand = Plus / Minus
Query: 1 cctgtctaagaaagtttactgagtatacttactcgataaggaaagctatgaagaacaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11859 cctgtctaagaaagtttactgagtatacttactcgataaggaaagctatgaagaacaatg 11800
Query: 61 ctaaaagacatttcctggtctacagcaacggctgagagcactcaaaaatatccacagcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11799 ctaaaagacatttcctggtctacagcaacggctgagagcactcaaaaatatccacagcga 11740
Query: 121 tascc-ggatttaaccatgctgttaatggtaattatcttcgctgacgggtatctaaaagg 179
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11739 tagcccggatttaaccatgctgttaatggtaattatcttcgctgacgggtatctaaaagg 11680
Query: 180 aaagcttcgaaatgtctttgtctaaagatgcgaaaaaaaaaggaaaggtccacaggtttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11679 aaagcttcgaaatgtctttgtctaaagatgcgaaaaaaaaaggaaaggtccacaggtttc 11620
Query: 240 taactaaaaagaaaaatgattcatgatgaagcgacaatacaagaagtaatggacggtagg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11619 taactaaaaagaaaaatgattcatgatgaagcgacaatacaagaagtaatggacggtagg 11560
Query: 300 taaaaactaacacgtacggaagagcaaataagttgtatatttcagcaccagtagttccga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11559 taaaaactaacacgtacggaagagcaaataagttgtatatttcagcaccagtagttccga 11500
Query: 360 ttggtgtcatctatacaccaagtcatttggggtggcaaacgtctggacgaatcgggcatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11499 ttggtgtcatctatacaccaagtcatttggggtggcaaacgtctggacgaatcgggcatt 11440
Query: 420 tagtggcttagtgctcatcaattgctgttccgtaagacggtattwattttttctttttct 479
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 11439 tagtggcttagtgctcatcaattgctgttccgtaagacggtattaattttttctttttct 11380
Query: 480 ctattatttgctatttcgcgtcttgagttaacgtgtcagaatgttatctccacttattga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11379 ctattatttgctatttcgcgtcttgagttaacgtgtcagaatgttatctccacttattga 11320
Query: 540 acaaagaaacatcccgaagtgagatcataaggwaccttgacggtaacaagggtggctttc 599
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 11319 acaaagaaacatcccgaagtgagatcataaggaaccttgacggtaacaagggtggctttc 11260
Query: 600 cgaatggctcctttcacgtggacactatttttctctganaggtaatttgatcacgtggac 659
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 11259 cgaatggctcctttcacgtggacactatttttctctgaaaggtaatttgatcacgtggac 11200
Query: 660 ggccttccatcacgtgtaaatkacgtttcttcatcgacgctttgtttttcgccattccag 719
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 11199 ggccttccatcacgtgtaaatgacgtttcttcatcgacgctttgtttttcgccattccag 11140
Query: 720 acaacaaaaaagttcagtttccataagawacgtaatgatcttgaaaaacagtcactttgg 779
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 11139 acaacaaaaaagttcagtttccataagaaacgtaatgatcttgaaaaacagtcactttgg 11080
Query: 780 aatgactgactgttcaaattacatat 805
||||||||||||||||||||||||||
Sbjct: 11079 aatgactgactgttcaaattacatat 11054
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6754
Number of Sequences: 1807
Number of extensions: 6754
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)